STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC2Armadillo repeat containing 2. (867 aa)    
Predicted Functional Partners:
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.770
CFAP70
Cilia and flagella associated protein 70.
   
 0.741
MICAL1
Microtubule associated monooxygenase, calponin and LIM domain containing 1.
      
 0.737
TTC21A
Tetratricopeptide repeat domain 21A.
   
  
 0.715
CFAP43
Cilia and flagella associated protein 43.
   
  
 0.712
QRICH2
Glutamine rich 2.
   
 0.705
TTC29
Tetratricopeptide repeat domain 29.
   
  
 0.699
NOL10
Nucleolar protein 10.
      
 0.694
ZFP37
Uncharacterized protein.
    
 
 0.687
CFAP44
Cilia and flagella associated protein 44.
   
 
 0.678
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.