STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNRC2Proline-rich nuclear receptor coactivator-like protein. (136 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
   
 0.965
DCP1B
Decapping mRNA 1B.
    
 0.890
SMG8
SMG8 nonsense mediated mRNA decay factor.
     
 0.777
SMG9
SMG9 nonsense mediated mRNA decay factor.
     
 0.724
FAM207A
Family with sequence similarity 207 member A.
      
 0.649
PTTG1IP
PTTG1 interacting protein.
      
 0.649
UPF1
UPF1 RNA helicase and ATPase.
   
 0.642
SLIRP
SRA stem-loop interacting RNA binding protein.
   
  
 0.632
DCP2
Decapping mRNA 2.
   
 
 0.617
SMG7
SMG7 nonsense mediated mRNA decay factor.
     
 0.611
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.