STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A13Solute carrier family 39 member 13. (364 aa)    
Predicted Functional Partners:
SLC30A2
Solute carrier family 30 member 2.
    
 
 0.832
STUB1
STIP1 homology and U-box containing protein 1.
 
      0.814
SLC30A10
Solute carrier family 30 member 10.
   
 0.798
FKBP14
Peptidylprolyl isomerase.
  
  
 0.772
SLC35F5
Solute carrier family 35 member F5.
   
  
 0.734
SLC12A6
Solute carrier family 12 member 6.
      
 0.711
SLC25A35
Solute carrier family 25 member 35; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.680
ZNF469
Zinc finger protein 469.
      
 0.671
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
  
 0.656
SDF2
Stromal cell derived factor 2.
   
  
 0.638
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.