STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC13Homeobox C13. (329 aa)    
Predicted Functional Partners:
CALCOCO1
Calcium binding and coiled-coil domain 1.
      
 0.678
PPP1R36
Protein phosphatase 1 regulatory subunit 36.
      
 0.635
DNAJC24
DnaJ heat shock protein family (Hsp40) member C24.
      
 0.635
PRSS53
Serine protease 53; Belongs to the peptidase S1 family.
   
  
 0.628
FOXN1
Forkhead box N1.
   
 
 0.574
TCHHL1
Trichohyalin like 1.
      
 0.568
LEF1
Lymphoid enhancer binding factor 1.
    
 
 0.504
PADI1
Peptidyl arginine deiminase 1.
      
 0.488
KRT83
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.481
PCBD1
Pterin-4 alpha-carbinolamine dehydratase 1.
      
 0.480
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.