STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSMD1CUB and Sushi multiple domains 1. (3564 aa)    
Predicted Functional Partners:
SH3RF3
SH3 domain containing ring finger 3.
     
 0.679
PIGA
Phosphatidylinositol glycan anchor biosynthesis class A.
   
  
 0.674
ASXL1
ASXL transcriptional regulator 1.
    
 0.672
MTMR11
Myotubularin related protein 11.
      
 0.650
NT5DC1
5'-nucleotidase domain containing 1.
      
 0.630
TENT5A
Terminal nucleotidyltransferase 5A.
      
 0.621
SPIDR
Scaffold protein involved in DNA repair.
      
 0.567
COLEC10
Collectin subfamily member 10.
      
 0.566
SH2D4A
SH2 domain containing 4A.
      
 0.565
ADGRB1
Adhesion G protein-coupled receptor B1; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.521
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.