STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM234AFamily with sequence similarity 234 member A. (553 aa)    
Predicted Functional Partners:
FGD4
FYVE, RhoGEF and PH domain containing 4.
      
 0.699
RNF122
Ring finger protein 122.
   
  
 0.697
SLC4A5
Anion exchange protein.
      
 0.695
APEH
Acylaminoacyl-peptide hydrolase.
      
 0.674
SF3B2
Splicing factor 3b subunit 2.
      
 0.597
LOC100630227
Uncharacterized protein.
      
 0.572
L3HYPDH
Trans-L-3-hydroxyproline dehydratase.
   
  
 0.568
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.553
KCTD18
Potassium channel tetramerization domain containing 18.
      
 0.495
ARHGAP1
Rho GTPase activating protein 1.
      
 0.495
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.