STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF185Ring finger protein 185. (192 aa)    
Predicted Functional Partners:
RNF121
Ring finger protein 121.
 
    
 0.862
ERLIN2
ER lipid raft associated 2.
   
 0.841
TMUB1
Transmembrane and ubiquitin like domain containing 1.
   
 
 0.815
RNF175
Ring finger protein 175.
 
 
  
 0.798
LIMK2
LIM domain kinase 2.
 
 
 0.797
C31H6orf120
Uncharacterized protein.
      
 0.769
TMEM259
Transmembrane protein 259.
    
 
 0.755
TMUB2
Transmembrane and ubiquitin like domain containing 2.
   
 
 0.753
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
   
 
 0.718
HERPUD2
HERPUD family member 2.
      
 0.714
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.