STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO4LIM domain only 4. (165 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
   
 0.736
LDB2
LIM domain binding 2.
   
 0.587
IDI1
Isopentenyl-diphosphate delta isomerase 1.
    
   0.501
F7DUP4_HORSE
Uncharacterized protein.
   
 
 0.493
PEG3
Paternally expressed 3.
   
 
 0.493
NOX3
NADPH oxidase 3.
      
 0.478
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.472
KLK10
Kallikrein related peptidase 10; Belongs to the peptidase S1 family.
    
 
 0.467
HMX2
H6 family homeobox 2.
    
 
 0.463
RBBP8
RB binding protein 8, endonuclease.
    
 
 0.404
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.