STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU3F1POU domain protein. (451 aa)    
Predicted Functional Partners:
TMEM121
Transmembrane protein 121.
      
 0.537
SOX10
SRY-box transcription factor 10.
    
 0.527
ATMIN
ATM interactor.
    
 0.521
BCL6B
BCL6B transcription repressor.
    
 0.517
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.516
RLF
Rearranged L-myc fusion.
    
 0.511
SOX14
SRY-box transcription factor 14.
   
 0.492
GJA10
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.476
C1QL2
Complement C1q like 2.
     
 0.475
FIBCD1
Fibrinogen C domain containing 1.
      
 0.474
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.