STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE1Spectrin repeat containing nuclear envelope protein 1. (8798 aa)    
Predicted Functional Partners:
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.998
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.994
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.958
SUN5
Sad1 and UNC84 domain containing 5.
    
 0.933
EMD
Emerin.
    
 
 0.902
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
 0.885
SYNE4
Spectrin repeat containing nuclear envelope family member 4.
     
 0.843
LMNB1
Lamin B1; Belongs to the intermediate filament family.
    
 0.835
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.783
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
   
 
0.749
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.