STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMFBCornichon family AMPA receptor auxiliary protein 1. (367 aa)    
Predicted Functional Partners:
TGFA
Transforming growth factor alpha.
   
 
 0.771
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.752
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.752
PRPF19
Pre-mRNA processing factor 19.
 
      0.716
STX18
Syntaxin 18.
   
  
 0.702
GRSF1
G-rich RNA sequence binding factor 1.
   
  
 0.701
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
   
 0.685
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.684
GORASP2
Golgi reassembly stacking protein 2.
   
 0.681
AREG
Amphiregulin.
     
 0.666
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.