STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARVCFARVCF delta catenin family member. (1137 aa)    
Predicted Functional Partners:
CTNNB1
Beta catenin 1.
   
0.794
CDH5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.711
CCDC88C
Coiled-coil domain containing 88C.
    
 
 0.684
DCLK2
Doublecortin like kinase 2.
      
 0.676
FAM126A
Family with sequence similarity 126 member A.
   
  
 0.673
CDH1
Cadherin 1; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.669
JUP
Junction plakoglobin.
   
0.668
ZBTB33
Zinc finger and BTB domain containing 33.
    
 
 0.667
CDH3
Cadherin 3; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.666
DCLK1
Doublecortin like kinase 1.
   
  
 0.665
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.