STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERHL2AB hydrolase-1 domain-containing protein. (657 aa)    
Predicted Functional Partners:
TMEM45A
Transmembrane protein 45A.
   
  
 0.859
CSTA
Cystatin A; Belongs to the cystatin family.
   
  
 0.799
PHLDA2
Pleckstrin homology like domain family A member 2.
   
  
 0.715
SYNM
Synemin; Belongs to the intermediate filament family.
   
  
 0.709
CHD1
Chromodomain helicase DNA binding protein 1.
    
 
 0.652
FAT1
FAT atypical cadherin 1.
      
 0.628
PSRC1
Proline and serine rich coiled-coil 1.
   
  
 0.549
FANK1
Fibronectin type III and ankyrin repeat domains 1.
   
 0.514
RNASET2
Uncharacterized protein; Belongs to the RNase T2 family.
   
  
 0.495
PALB2
Partner and localizer of BRCA2.
  
 0.490
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.