STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF3Membrane associated ring-CH-type finger 3. (460 aa)    
Predicted Functional Partners:
URB2
URB2 ribosome biogenesis homolog.
   
  
 0.666
OSBPL7
Oxysterol binding protein like 7.
   
  
 0.661
RNF144A
RBR-type E3 ubiquitin transferase.
   
 
 0.660
TOR1AIP1
Torsin 1A interacting protein 1.
   
  
 0.659
B3GALT1
Hexosyltransferase.
   
  
 0.658
SYCE1L
Uncharacterized protein.
      
 0.657
ZNF775
Zinc finger protein 775.
      
 0.657
ZNF567
Zinc finger protein 567.
      
 0.657
PEX12
Peroxisomal biogenesis factor 12.
      
 0.643
HLCS
Holocarboxylase synthetase.
      
 0.637
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.