STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM13Histocompatibility minor 13. (426 aa)    
Predicted Functional Partners:
HMOX1
Heme oxygenase 1.
   
 
 0.862
CCNB1IP1
Cyclin B1 interacting protein 1.
      
 0.812
SSR3
Signal sequence receptor subunit 3.
   
 
 0.794
SSR2
Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.
   
 
 0.778
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 0.748
SPCS1
Signal peptidase complex subunit 1.
   
  
 0.744
RNF139
Ring finger protein 139.
   
 0.718
COX6B2
Cytochrome c oxidase subunit; Belongs to the cytochrome c oxidase subunit 6B.
      
 0.672
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
   
 
 0.639
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.636
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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