STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLFM1Olfactomedin 1. (485 aa)    
Predicted Functional Partners:
TTLL11
Tubulin tyrosine ligase like 11.
   
  
 0.693
MTERF2
Mitochondrial transcription termination factor 2.
      
 0.656
OTOP3
Otopetrin 3.
      
 0.573
TENM4
Teneurin transmembrane protein 4.
   
 
 0.516
RGR
Retinal G protein coupled receptor; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
   
  
 0.486
KIDINS220
Kinase D interacting substrate 220.
   
 
 0.486
TPRKB
TP53RK binding protein; Belongs to the CGI121/TPRKB family.
      
 0.476
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
   
  
 0.475
SURF4
Surfeit 4.
      
 0.475
UBAC1
UBA domain containing 1.
      
 0.475
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.