STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC9C1Solute carrier family 9 member C1. (1184 aa)    
Predicted Functional Partners:
SCAPER
S-phase cyclin A associated protein in the ER.
      
 0.622
SLC9B1
Solute carrier family 9 member B1.
      
 0.573
EFCAB9
EF-hand calcium binding domain 9.
   
 0.537
SPEF2
Sperm flagellar 2.
   
 0.521
FSIP2
Fibrous sheath interacting protein 2.
   
  
 0.506
LOC100072143
Uncharacterized protein.
   
 0.499
SLC9A9
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
   
  
 0.491
PSMA4
Proteasome subunit alpha type.
      
 0.491
PARM1
Prostate androgen-regulated mucin-like protein 1.
      
 0.491
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
   
  
 0.478
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.