STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTBP3Polypyrimidine tract binding protein 3. (802 aa)    
Predicted Functional Partners:
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.773
ZNF236
Zinc finger protein 236.
      
 0.739
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.734
PUM2
Pumilio RNA binding family member 2.
   
 
 0.726
CMBL
Carboxymethylenebutenolidase homolog.
      
 0.697
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.686
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.685
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
0.681
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.673
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.661
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.