STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLK4CDC like kinase 4; Belongs to the protein kinase superfamily. (484 aa)    
Predicted Functional Partners:
CLK1
CDC like kinase 1.
  
 
 
0.982
RSRC1
Arginine and serine rich coiled-coil 1.
      
 0.799
THRAP3
Thyroid hormone receptor associated protein 3.
    
 
 0.778
PRPF18
SFM domain-containing protein.
   
  
 0.778
RNPS1
RNA binding protein with serine rich domain 1.
   
 
 0.685
CWC22
CWC22 spliceosome associated protein homolog.
   
  
 0.674
SRSF1
Serine and arginine rich splicing factor 1.
   
 
 0.637
LOC111771889
RALY heterogeneous nuclear ribonucleoprotein.
    
 
 0.625
RALY
RALY heterogeneous nuclear ribonucleoprotein.
    
 
 0.625
LOC111772162
RNA-binding protein Raly.
    
 
 0.625
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.