STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLBP2Stem loop binding protein 2. (184 aa)    
Predicted Functional Partners:
EIF4E
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.866
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.784
LSM11
LSM11, U7 small nuclear RNA associated.
     
 0.755
ERI1
Exoribonuclease 1.
   
 
 0.736
ALYREF
Aly/REF export factor.
   
 
 0.711
MIF4GD
MIF4G domain containing.
    
 
 0.704
CTIF
Cap binding complex dependent translation initiation factor.
    
 
 0.683
LSM10
LSM10, U7 small nuclear RNA associated.
   
 
 0.679
GARS1
Glycyl-tRNA synthetase.
      
 0.657
RRM2
Ribonucleotide reductase regulatory subunit M2.
   
  
 0.650
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.