STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGFG1ArfGAP with FG repeats 1. (666 aa)    
Predicted Functional Partners:
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
   
 0.934
ITSN2
Intersectin 2.
   
 0.899
FAM126B
Family with sequence similarity 126 member B.
   
  
 0.704
GOLGA7B
Golgin A7 family member B.
      
 0.701
COTL1
MTOR associated protein, eak-7 homolog.
   
  
 0.701
DPY19L2
Dpy-19 like 2.
      
 0.696
MACO1
Macoilin 1.
      
 0.683
ITSN1
Intersectin 1.
   
 0.672
CCDC42
Coiled-coil domain containing 42.
      
 0.672
STAM2
Signal transducing adaptor molecule 2.
   
 
 0.672
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.