STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM23Tripartite motif containing 23. (574 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.844
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.824
TRIM44
Tripartite motif containing 44.
   
 0.791
ITSN1
Intersectin 1.
   
 0.762
RPS27A
Ribosomal protein S27a.
   
 0.697
ENSECAP00000044533
Ubiquitin-like domain-containing protein.
   
 0.697
TRIM11
Tripartite motif containing 11.
    
 0.686
TRIM27
Tripartite motif containing 27.
    
 0.675
GAK
Cyclin G associated kinase.
   
 0.662
NME8
NME/NM23 family member 8.
   
 0.645
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.