STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM8PR/SET domain 8. (689 aa)    
Predicted Functional Partners:
TMEM215
Transmembrane protein 215.
      
 0.771
LOC102150786
Uncharacterized protein.
   
  
 0.698
GBE1
1,4-alpha-glucan-branching enzyme; Required for normal glycogen accumulation. The alpha 1-6 branches of glycogen play an important role in increasing the solubility of the molecule; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
      
 0.696
BTBD3
BTB domain containing 3.
      
 0.678
IQUB
IQ motif and ubiquitin domain containing.
   
  
 0.670
PRKAG2
Protein kinase AMP-activated non-catalytic subunit gamma 2.
      
 0.650
GYG1
Glycogenin 1.
      
 0.636
OLIG3
Oligodendrocyte transcription factor 3.
   
  
 0.573
F6SIP3_HORSE
Uncharacterized protein.
    
 
 0.568
PRDM5
Zinc finger protein.
   
 
 0.568
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.