STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2UUbiquitin conjugating enzyme E2 U; Belongs to the ubiquitin-conjugating enzyme family. (353 aa)    
Predicted Functional Partners:
UBOX5
U-box domain containing 5.
    
 0.968
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.917
UBE2Z
Ubiquitin conjugating enzyme E2 Z.
     
 0.903
RNF40
E3 ubiquitin protein ligase; Belongs to the BRE1 family.
   
 0.880
RNF20
E3 ubiquitin protein ligase; Belongs to the BRE1 family.
   
 0.880
ENSECAP00000023797
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.872
RAD18
RAD18 E3 ubiquitin protein ligase.
   
 0.863
UBE2V2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.829
UBA6
Ubiquitin like modifier activating enzyme 6.
  
 0.776
UBA1
Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.774
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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