STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX6SRY-box 6. (870 aa)    
Predicted Functional Partners:
CTNNB1
Beta catenin 1.
   
 0.763
ACAN
Aggrecan.
   
 
 0.737
SOX9
SRY-box 9.
   
0.731
COL2A1
Collagen type II alpha 1 chain.
   
  
 0.708
SOX5
SRY-box 5.
  
 
0.704
LHX6
LIM homeobox 6.
    
 
 0.682
FOXJ3
Forkhead box J3.
    
 
 0.681
LHX8
LIM homeobox 8.
   
 
 0.645
JUP
Junction plakoglobin.
   
 0.640
MYH7B
Myosin heavy chain 7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.605
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.