STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECAP00000025866Uncharacterized protein. (296 aa)    
Predicted Functional Partners:
TMBIM4
Uncharacterized protein; Belongs to the BI1 family.
      
 0.667
LEMD3
LEM domain containing 3.
    
 
 0.558
IRAK3
Interleukin 1 receptor associated kinase 3.
    
 0.512
TTC39A
Tetratricopeptide repeat domain 39A.
      
 0.493
SCIMP
SLP adaptor and CSK interacting membrane protein.
 
    
 0.487
MEPE
Matrix extracellular phosphoglycoprotein.
      
 0.483
NIPAL2
NIPA like domain containing 2.
      
 0.481
NEURL4
Neuralized E3 ubiquitin protein ligase 4.
      
 0.473
ST6GALNAC4
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
      
 0.469
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
      
 0.468
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.