STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C4General transcription factor IIIC subunit 4. (821 aa)    
Predicted Functional Partners:
GTF3C3
General transcription factor IIIC subunit 3.
   
 0.998
GTF3C5
General transcription factor IIIC subunit 5.
   
 0.988
GTF3C1
General transcription factor IIIC subunit 1.
   
 0.983
GTF3C2
General transcription factor IIIC subunit 2; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.969
GTF3C6
General transcription factor IIIC subunit 6.
   
 0.927
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
     
 0.845
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
     
 0.791
ZNF512
Zinc finger protein 512.
   
 0.768
UCKL1
Zinc finger protein 512B.
    
 0.764
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.749
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.