STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP1La ribonucleoprotein domain family member 1. (1387 aa)    
Predicted Functional Partners:
EIF4B
Eukaryotic translation initiation factor 4B.
   
 
 0.831
PABPC1
Uncharacterized protein.
   
 
 0.741
PABPC4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.696
DHX9
DExH-box helicase 9.
   
 0.663
EIF4E
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.643
EIF5B
Eukaryotic translation initiation factor 5B.
   
  
 0.630
BANP
BTG3 associated nuclear protein.
      
 0.629
ZCCHC13
Zinc finger CCHC-type containing 13.
   
 
 0.600
ZNF106
Zinc finger protein 106.
   
 
 0.594
NAT8L
N-acetyltransferase 8 like.
    
 
 0.579
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.