STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM196Transmembrane protein 196. (185 aa)    
Predicted Functional Partners:
DNAH11
Dynein axonemal heavy chain 11.
      
 0.781
TMEM242
Transmembrane protein 242.
      
 0.674
SCAF8
SR-related CTD associated factor 8.
      
 0.611
SP4
Sp4 transcription factor.
      
 0.579
TMEM63C
Transmembrane protein 63C.
   
  
 0.578
CRYZL1
Crystallin zeta like 1.
      
 0.569
SERAC1
Serine active site containing 1.
      
 0.546
TMEM207
Transmembrane protein 207.
   
  
 0.521
TMEM184C
Transmembrane protein 184C.
      
 0.514
BRWD1
Bromodomain and WD repeat domain containing 1.
      
 0.485
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.