STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP290Centrosomal protein 290. (2958 aa)    
Predicted Functional Partners:
IQCB1
IQ motif containing B1.
   
 
 0.945
TMEM67
Transmembrane protein 67.
   
  
 0.931
AHI1
Uncharacterized protein.
   
 0.922
PLK1
Serine/threonine-protein kinase PLK.
   
 0.900
CEP164
Centrosomal protein 164.
   
 0.880
ARL13B
ADP ribosylation factor like GTPase 13B.
   
 
 0.875
CC2D2A
Coiled-coil and C2 domain containing 2A.
   
 
 0.869
RPGR
Uncharacterized protein.
   
 0.865
NPHP4
Nephrocystin 4.
    
 
 0.859
NPHP1
Nephrocystin 1.
   
 0.856
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.