STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin 3. (955 aa)    
Predicted Functional Partners:
NUP153
Nucleoporin 153.
   
 
 0.934
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 
 0.927
TNPO1
Transportin 1.
   
 
 0.899
IPO7
Importin 7.
   
  
 0.864
SRSF1
Serine and arginine rich splicing factor 1.
   
 
 0.858
TRIM34
Uncharacterized protein.
      
 0.792
IPO11
Importin 11.
   
  
 0.764
RANBP2
RAN binding protein 2.
   
  
 0.763
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
    0.740
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 
 0.719
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.