STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOC2BDouble C2 domain beta. (431 aa)    
Predicted Functional Partners:
RPH3AL
Rabphilin 3A like (without C2 domains).
 
    
 0.799
VSTM2B
V-set and transmembrane domain containing 2B.
   
  
 0.759
LONRF1
LON peptidase N-terminal domain and ring finger 1.
   
  
 0.701
SNPH
RAD21 cohesin complex component like 1.
   
  
 0.685
GASK1B
Golgi associated kinase 1B.
      
 0.678
PGM2
Phosphoglucomutase 2.
      
 0.640
AHSA1
Activator of HSP90 ATPase activity 1.
   
  
 0.627
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.596
SERTAD1
SERTA domain containing 1.
      
 0.594
TNFAIP8L3
TNF alpha induced protein 8 like 3.
   
  
 0.583
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.