STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC15CWC15 spliceosome associated protein homolog. (231 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
   
 0.998
PRPF19
Pre-mRNA processing factor 19.
    
 0.997
PLRG1
Pleiotropic regulator 1.
   
 0.997
BCAS2
BCAS2 pre-mRNA processing factor.
   
 0.993
CTNNBL1
Catenin beta like 1.
    
 0.993
BUD31
BUD31 homolog.
   
 0.987
SNW1
SNW domain containing 1.
   
 0.987
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 0.983
PRPF8
Pre-mRNA processing factor 8.
   
 0.983
XAB2
XPA binding protein 2.
   
 0.983
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.