STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOVA1NOVA alternative splicing regulator 1. (507 aa)    
Predicted Functional Partners:
PTBP1
Polypyrimidine tract binding protein 1.
    
 
 0.722
PTBP2
Polypyrimidine tract binding protein 2.
   
 
 0.708
SRRM3
Serine/arginine repetitive matrix 3.
      
 0.699
PRSS53
Serine protease 53; Belongs to the peptidase S1 family.
      
 0.686
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.683
ADGRA1
Adhesion G protein-coupled receptor A1; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.679
ABHD10
Abhydrolase domain containing 10.
      
 0.679
BICRAL
BRD4 interacting chromatin remodeling complex associated protein like.
   
  
 0.679
IKZF5
IKAROS family zinc finger 5.
      
 0.674
RBFOX2
RNA binding fox-1 homolog 2.
      
 0.659
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.