STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE16Zinc finger FYVE-type containing 16. (1545 aa)    
Predicted Functional Partners:
SMAD3
Mothers against decapentaplegic homolog.
   
 0.968
SMAD2
Mothers against decapentaplegic homolog.
   
 0.966
ZFYVE9
Zinc finger FYVE domain-containing protein.
   
 
0.903
PTPN23
Protein tyrosine phosphatase non-receptor type 23.
   
 
 0.793
SMAD4
Mothers against decapentaplegic homolog.
   
 0.704
SMAD9
Mothers against decapentaplegic homolog.
   
 0.690
SMAD1
Mothers against decapentaplegic homolog.
   
 0.660
SMAD5
Mothers against decapentaplegic homolog.
   
 0.657
NUDT3
Nudix hydrolase 3.
      
 0.608
SMAD6
Mothers against decapentaplegic homolog.
   
 0.607
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.