STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM7Tripartite motif containing 7. (495 aa)    
Predicted Functional Partners:
GYG1
Glycogenin 1.
   
 
 0.915
ARMC12
Armadillo repeat containing 12.
    
 
 0.843
GYG2
Glycogenin 2.
   
 
 0.742
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
    
 
 0.711
KLHL40
Kelch like family member 40.
   
 
 0.704
AKTIP
AKT interacting protein.
    
 
 0.630
NKIRAS2
NFKB inhibitor interacting Ras like 2.
      
 0.620
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.566
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
    
 0.548
C5H1orf116
Chromosome 5 C1orf116 homolog.
      
 0.541
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.