STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCLNNicalin. (684 aa)    
Predicted Functional Partners:
TMEM147
Transmembrane protein 147.
   
 
 0.963
CCDC47
Coiled-coil domain containing 47.
    
 
 0.958
SDR39U1
Short chain dehydrogenase/reductase family 39U member 1.
      
 0.907
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 
 0.865
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.865
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
   
 
 0.846
CLPTM1L
CLPTM1 like.
   
  
 0.845
TMEM43
Transmembrane protein 43.
      
 0.836
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
   
 
 0.826
HACD3
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
      
 0.824
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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