STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC141Coiled-coil domain containing 141. (1490 aa)    
Predicted Functional Partners:
CER1
Cerberus 1, DAN family BMP antagonist.
   
  
 0.820
LGI2
Leucine rich repeat LGI family member 2.
    
 0.702
UNC45B
Unc-45 myosin chaperone B.
   
 
 0.690
PDLIM4
PDZ and LIM domain 4.
    
 0.674
WDR18
WD repeat domain 18.
   
 0.630
TTN
Titin.
 
 
  
0.629
FNDC4
Fibronectin type III domain containing 4.
      
 0.599
KLHL38
Kelch like family member 38.
   
 
 0.597
TEX10
Testis expressed 10.
   
 0.595
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 0.589
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.