STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS8Galectin. (357 aa)    
Predicted Functional Partners:
CALCOCO2
Calcium binding and coiled-coil domain 2.
    
 
 0.962
TAX1BP1
Tax1 binding protein 1.
   
 
 0.784
TRIM16
Uncharacterized protein.
    
 
 0.636
TDG
Thymine DNA glycosylase.
   
  
 0.605
SIGLEC15
Sialic acid binding Ig like lectin 15.
    
 0.561
SGCA
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 
 0.548
MTFR1
Mitochondrial fission regulator 1.
    
 0.540
MUC13
Uncharacterized protein.
    
 0.518
TBC1D25
TBC1 domain family member 25.
   
  
 0.501
ITGAD
Integrin subunit alpha X; Belongs to the integrin alpha chain family.
   
 
 0.498
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.