STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGA1Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (699 aa)    
Predicted Functional Partners:
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
  
 
0.965
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
  
0.963
IGF2R
Insulin like growth factor 2 receptor.
   
 
 0.915
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.911
BACE1
Beta-secretase 1; Belongs to the peptidase A1 family.
    
 0.882
SORL1
Sortilin related receptor 1.
    
 
 0.879
CCDC91
Coiled-coil domain containing 91.
    
 
 0.848
RABGEF1
RAB guanine nucleotide exchange factor 1.
   
 0.821
ARF1
ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.815
SORT1
Sortilin.
   
 
 0.773
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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