STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGA3Golgi associated, gamma adaptin ear containing, ARF binding protein 3. (813 aa)    
Predicted Functional Partners:
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.969
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
  
0.963
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
  
0.963
IGF2R
Insulin like growth factor 2 receptor.
   
 
 0.949
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.936
M6PR
Mannose-6-phosphate receptor, cation dependent.
    
 
 0.897
ARF1
ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.799
TEPSIN
TEPSIN adaptor related protein complex 4 accessory protein.
   
  
 0.711
UBC
Ubiquitin B.
   
   0.659
UBC-2
Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...]
   
   0.659
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.