STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC2Zinc finger CCHC-type containing 2. (1178 aa)    
Predicted Functional Partners:
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 
 0.954
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
  
 0.726
DCC
DCC netrin 1 receptor.
      
 0.686
TNFRSF11A
TNF receptor superfamily member 11a.
      
 0.673
PHLPP1
PH domain and leucine rich repeat protein phosphatase 1.
   
  
 0.664
FAM117B
Family with sequence similarity 117 member B.
      
 0.650
ZNF518A
Uncharacterized protein.
   
 
 0.646
N4BP1
NEDD4 binding protein 1.
   
  
 0.588
TMEM150B
Transmembrane protein 150B.
      
 0.572
SF3B2
Splicing factor 3b subunit 2.
   
  
 0.474
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.