STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPTNNeuroplastin. (398 aa)    
Predicted Functional Partners:
SYT5
Synaptotagmin 5.
   
 
 0.887
PLD3
Phospholipase D family member 3.
   
  
 0.653
CYP51A1
Cytochrome P450 family 51 subfamily A member 1; Belongs to the cytochrome P450 family.
      
 0.590
RTN4
Reticulon.
   
  
 0.588
LOC100053499
Histone H2B type 1.
    
 0.557
LOC100053847
Histone H2B type 1.
    
 0.557
SLC18A3
Solute carrier family 18 member A3.
     
 0.549
PELO
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.517
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
   
  
 0.483
H2AJ
Histone H2A; Belongs to the histone H2A family.
    
 0.423
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.