STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41L1Erythrocyte membrane protein band 4.1 like 1. (1725 aa)    
Predicted Functional Partners:
CNBD2
Cyclic nucleotide binding domain containing 2.
 
 
  
 0.865
GRIPAP1
GRIP1 associated protein 1.
   
  
 0.865
AMIGO1
Adhesion molecule with Ig like domain 1.
     
 0.800
ROMO1
Reactive oxygen species modulator 1.
      
 0.715
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
    
 0.698
NLGN1
Neuroligin 1.
   
 0.694
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.690
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.688
PKP4
Plakophilin 4.
   
 
 0.681
CTCFL
CCCTC-binding factor like.
      
 0.675
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.