STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL57Mitochondrial ribosomal protein L57. (102 aa)    
Predicted Functional Partners:
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.988
MRPL43
L51_S25_CI-B8 domain-containing protein.
   
 
 0.982
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.981
MRPL4
Mitochondrial ribosomal protein L4.
    
   0.922
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.898
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 
 0.886
AURKAIP1
Aurora kinase A interacting protein 1.
   
 
 0.882
MRPS34
Mitochondrial ribosomal protein S34.
   
 
 0.874
MRPL40
Mitochondrial ribosomal protein L40.
   
   0.857
GADD45GIP1
GADD45G interacting protein 1.
   
 
 0.854
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.