STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPNS1Calpain small subunit 1. (318 aa)    
Predicted Functional Partners:
CAPN14
Uncharacterized protein; Belongs to the peptidase C2 family.
 
 
 0.958
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
   
  
 0.945
CAPN1
Calpain 1; Belongs to the peptidase C2 family.
   
0.908
CAPN5
Calpain 5; Belongs to the peptidase C2 family.
 
 
 0.907
CAST
Calpastatin.
   
 0.871
CAPN2
Calpain 2; Belongs to the peptidase C2 family.
   
0.857
CAPN6
Calpain 6; Belongs to the peptidase C2 family.
 
 
 0.845
CAPN13
Calpain 13; Belongs to the peptidase C2 family.
   
0.796
CAPN8
Calpain 8; Belongs to the peptidase C2 family.
   
0.785
CACHD1
Cache domain containing 1.
      
 0.781
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.