STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT17Synaptotagmin 17. (502 aa)    
Predicted Functional Partners:
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
      
 0.851
ABCD3
ATP binding cassette subfamily D member 3.
      
 0.770
NT5DC3
5'-nucleotidase domain containing 3.
      
 0.740
TAF2
TATA-box binding protein associated factor 2.
      
 0.721
MTBP
MDM2 binding protein.
    
 
 0.713
DSCC1
DNA replication and sister chromatid cohesion 1.
      
 0.688
BCAS1
Breast carcinoma amplified sequence 1.
   
  
 0.677
SNTB1
Syntrophin beta 1.
      
 0.677
ENTPD4
Ectonucleoside triphosphate diphosphohydrolase 4; Belongs to the GDA1/CD39 NTPase family.
      
 0.650
GSG1L
GSG1 like.
      
 0.601
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.