STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNCRIPSynaptotagmin binding cytoplasmic RNA interacting protein. (623 aa)    
Predicted Functional Partners:
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.923
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.826
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
 0.823
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.811
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.803
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
  
 
0.793
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
0.779
DHX15
DEAH-box helicase 15.
   
 
 0.777
YBX1
Y-box binding protein 1.
   
 0.767
DHX9
DExH-box helicase 9.
   
 0.758
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.