STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPEF2Sperm flagellar 2. (2167 aa)    
Predicted Functional Partners:
SPAG6
Sperm associated antigen 6.
   
 0.869
DNAI1
Dynein axonemal intermediate chain 1.
   
  
 0.852
EFCAB6
EF-hand calcium binding domain 6.
   
  0.813
SPEF1
Sperm flagellar 1.
   
 
 0.799
CCDC40
Coiled-coil domain containing 40.
    
 0.793
CCDC39
Coiled-coil domain containing 39.
   
 0.750
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 0.741
CIB4
Calcium and integrin binding family member 4.
    
 0.729
CFAP43
Cilia and flagella associated protein 43.
   
  
 0.717
SSMEM1
Serine rich single-pass membrane protein 1.
      
 0.713
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.