STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABTB1Ankyrin repeat and BTB domain containing 1. (478 aa)    
Predicted Functional Partners:
VARS1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.770
OGDHL
Oxoglutarate dehydrogenase like.
    
 
 0.717
CARD19
Caspase recruitment domain family member 19.
   
  
 0.710
SLC9C2
Cyclic nucleotide-binding domain-containing protein.
    
 0.622
PCYOX1
Prenylcysteine oxidase 1.
   
  
 0.592
MEGF8
Multiple EGF like domains 8.
    
 
 0.582
DPEP1
Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
   
 
 0.575
ASB5
Ankyrin repeat and SOCS box containing 5.
      
 0.574
EEF1D
Eukaryotic translation elongation factor 1 delta; Belongs to the EF-1-beta/EF-1-delta family.
   
 
 0.551
TMEM91
Transmembrane protein 91.
   
  
 0.549
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.